API
genesis.Genesis2 ¶
Genesis2(*args, group=None, **kwargs)
Bases: CommandWrapper
Files will be written into a temporary directory within workdir. If workdir=None, a location will be determined by the system.
Source code in genesis/genesis2.py
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Functions¶
genesis.Genesis2.archive ¶
archive(h5=None)
Archive all data to an h5 handle or filename.
If no file is given, a file based on the fingerprint will be created.
Source code in genesis/genesis2.py
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genesis.Genesis2.final_particles ¶
final_particles()
Returns a ParticleGroup object from dpa data (if present)
Source code in genesis/genesis2.py
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genesis.Genesis2.get_executable ¶
get_executable()
Gets the full path of the executable from .command, .command_mpi Will search environmental variables: Genesis2.command_env='GENESIS2_BIN' Genesis2.command_mpi_env='GENESIS2_MPI_BIN'
Source code in genesis/genesis2.py
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genesis.Genesis2.get_run_script ¶
get_run_script(write_to_path=True)
Assembles the run script usg self.mpi_run string of the form: 'mpirun -n {n} {command_mpi}' Optionally writes a file 'run' with this line to path.
Source code in genesis/genesis2.py
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genesis.Genesis2.load_archive ¶
load_archive(h5, configure=True)
Loads input and output from archived h5 file.
See: Genesis.archive
Source code in genesis/genesis2.py
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genesis.Genesis2.run ¶
run()
Run Genesis2
Source code in genesis/genesis2.py
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genesis.Genesis2.write_input ¶
write_input()
Writes all input files
Source code in genesis/genesis2.py
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genesis.Genesis2.write_input_file ¶
write_input_file()
Write parameters to main .in file
Source code in genesis/genesis2.py
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genesis.Genesis2.write_wavefront ¶
write_wavefront(h5=None)
Write an openPMD wavefront from the dfl
Source code in genesis/genesis2.py
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